BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F09LP1|AL426076
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1561 0.0
>3x_Contig1713
Length = 18539
Score = 1561 bits (783), Expect = 0.0
Identities = 793/801 (99%)
Strand = Plus / Plus
Query: 1 gatctttccaacgcaattgtcgctcaagatgaaatgggtagaccatttatcatcgttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11408 gatctttccaacgcaattgtcgctcaagatgaaatgggtagaccatttatcatcgttaga 11467
Query: 61 gaccaaggtaacaagaaaagacagcatgggatcgatgctaagaaatcacatatcctagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11468 gaccaaggtaacaagaaaagacagcatgggatcgatgctaagaaatcacatatcctagct 11527
Query: 121 tckagatccgtggcttcgatcattaagacctctttgggtcctcgtgggttggataagatc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11528 tctagatccgtggcttcgatcattaagacctctttgggtcctcgtgggttggataagatc 11587
Query: 181 ttaatctcgccagatggcgagattgccatcactaacgatggtgccaccattctttccaga 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11588 ttaatctcgccagatggcgagattaccatcactaacgatggtgccaccattctttccaga 11647
Query: 241 atggaattggataacgaaatcgccaagttgttggtccaattgtccaggtcgcaggacgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11648 atggaattggataacgaaatcgccaagttgttggtccaattgtccaggtcgcaggacgat 11707
Query: 301 gaaattggtgatggtaccaccggkgttgtcgtactagcttgtgcctkgttggatcaagcg 360
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 11708 gaaattggtgatggtaccaccggtgttgtcgtactagcttgtgccttgttggatcaagcg 11767
Query: 361 ttagatttgatcgagaaaggkgttcatccgattaagatcgctaatgggtttgacaaggct 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11768 ttagatttgatcgagaaaggtgttcatccgattaagatcgctaatgggtttgacaaggct 11827
Query: 421 tctcaaatcgccatcgcgcatttggactctcaagckgatgatatctctgcttctgcaaca 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 11828 tctcaaatcgccatcgcgcatttggactctcaagctgatgatatctctgcttctgcaaca 11887
Query: 481 caggaggaattcaaaagttacttgttcaaggcggcaaagacttcattggggtccaagatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11888 caggaggaattcaaaagttacttgttcaaggcggcaaagacttcattggggtccaagatc 11947
Query: 541 gtttctaaggatcacgatttgtttgckcaaatggccgttgatgcgattaccacggttatg 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11948 gtttctaaggatcacgatttgtttgctcaaatggccgttgatgcgattaccacggttatg 12007
Query: 601 gattcgaatagaagggacgktgatttcgatttgatcaaattagaaggacgtgttggtgga 660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12008 gattcgaatagaagggacgttgatttcgatttgatcaaattagaaggacgtgttggtgga 12067
Query: 661 tctttgaaagactctaagcttattaaaggtgtcgttatagataaggatttctctcatcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12068 tctttgaaagactctaagcttattaaaggtgtcgttatagataaggatttctctcatcct 12127
Query: 721 caaatgcccaaatcattagaaggcgatttgaagttggctattctaacttgccccttcgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12128 caaatgcccaaatcattagaaggcgatttgaagttggctattctaacttgccccttcgaa 12187
Query: 781 cctccaaaaccaaagacgaaa 801
|||||||||||||||||||||
Sbjct: 12188 cctccaaaaccaaagacgaaa 12208
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4894
Number of Sequences: 1807
Number of extensions: 4894
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)